Silke Trißl

Publications

Silke Trißl, Florian Zipser, and Ulf Leser
Applying GRIPP to XML Documents containing XInclude and XLink Elements
Berliner XML Tage (to appear) September 2007.
Philipp Hussels, Silke Trißl, and Ulf Leser
What's new? What's certain? - Scoring Search Results in the Presence of Overlapping Data Sources
Proceedings of the 4th Workshop on Data Integration in the Life Sciences (DILS07) In Lecture Notes in Computer Science, Volume 4544/2007, pages 231-246, 2007.
Silke Trißl
Cost-based Optimization of Graph Queries
Proceedings of the 1st PhD Workshop on Innovative Database Research (IDAR) in conjunction with ACM SIGMOD2007 Beijing, China, June 2007.
Silke Trißl and Ulf Leser
Fast and Practical Indexing and Querying of Very Large Graphs
Proceedings of the ACM SIGMOD International Conference on Management of Data, Beijing, China, pages 845-856, June 2007.

Kristian Rother, Mathias Dunkel, Elke Michalsky, Silke Trißl, Andrean Goede, Ulf Leser, and Robert Preissner
A structural keystone for drug design
Journal of Integrative Bioinformatics 3(1), 2006.
[JIB-Link]
Silke Triß, Ulf Leser
GRIPP - Indexing and Querying Graphs based on Pre- and Postorder Numbering
Technical Report No 207, Department for Computer Science, Humboldt-Universität zu Berlin, 2006.
[Paper]

Silke Trissl and Ulf Leser
Querying ontologies in relational database systems
Second Workshop on Data Integration in the Life Sciences (DILS), San Diago, USA.
In Lecture Notes in Computer Science, Volume 3615, Pages 63 - 79, July 2005.
[SpringerLink]
Silke Trißl
Anfragen in Ontologien in relationalen Datenbanken (German).
17. GI-Workshop über 'Grundlagen von Datenbanken', Wörlitz, Germany, May 2005.
[Paper]
Silke Trißl, Kristian Rother, Heiko Müller, Thomas Steinke, Ina Koch, Robert Preissner, Cornelius Frömmel, and Ulf Leser
Columba: An Integrated Database of Proteins, Structures, and Annotations
BMC Bioinformatics, 6:81, 2005.
[BMC Bioinformatics] [Paper]

Kristian Rother, Heiko Müller, Silke Trissl, Ina Koch, Thomas Steinke, Robert Preissner, Cornelius Frömmel, and Ulf Leser
COLUMBA: Multidimensional Data Integration of Protein Annotations
First International Workshop on Data Integration in the Life Sciences (DILS), Leipzig, Germany (2004).
In Lecture Notes in Computer Science Volume 2994, Pages 156 - 171, March 2004.
[SpringerLink]
Silke Trissl, Kristian Rother, and Ulf Leser
Columba - A Database of annotated protein structure
ECCB-Poster, Glasgow, UK, August 2004.
[Abstract] [Poster]
Stefan Günther, Kristian Rother, and Silke Trissl
The usefulness of integrated databases: a case study of COLUMBA
ECCB-Poster, Glasgow, UK, August 2004.
[Abstract] [Poster]
Silke Trissl, Kristian Rother, Heiko Müller, and Ulf Leser Columba - A Database of Annotations of Protein Structure
HGM-Poster, Berlin, Germany, April 2004.
[Abstract] [Poster]

Kristian Rother, Silke Trissl, Heiko Müller, Patrick May, Rene Heek, Robert Preissner, Thomas Steinke, Ina Koch, Ulf Leser, Cornelius Frömmel
Columba - A Database of Annotations of Protein Structure
ECCB-Poster September 2003, Paris, France.
[Abstract] [Poster]